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BIOPHYSICS

'Biophysics' (also 'biological physics') is an interdisciplinary science that applies the theories and methods of physics to questions of biology.
Biophysics research today comprises a lot of specific biological studies, which don't share a unique identifying factor, nor subject themselves to clear and concise definitions. The studies included under the umbrella of biophysics range from sequence analysis to neural networks. In the past, biophysics included creating mechanical limbs and nanomachines to regulate biological functions. Today, these are more commonly referred to as belonging to the fields of bioengineering and nanotechnology respectively.
Biophysics is an interdisciplinary science that applies the discipline of physics to the study of biological phenomena.
Traditional studies in biochemistry and molecular biology are conducted using statistical ensemble experiments, typically using pico- to micro-molar concentrations of macromolecules. Because the molecules that comprise living cells are so small, techniques such as PCR amplification, gel blotting, fluorescence labeling and in vivo staining are used so that experimental results are observable with an unaided eye or, at most, optical magnification. Using these techniques, researchers in these subjects attempt to elucidate the complex systems of interactions that give rise to the processes that make life possible.
Biophysics, in contrast, typically addresses similar biological questions, but the questions are asked at a molecular level. By drawing knowledge and experimental techniques from a wide variety of disciplines (as described below), biophysicists are able to indirectly observe or model the structures and interactions of ''individual'' molecules or complexes of molecules.
In addition to things like solving a protein structure or measuring the kinetics of interactions, biophysics is also understood to encompass research areas that apply models and experimental techniques derived from physics (e.g. electromagnetism and quantum mechanics) to larger systems such as tissues or organs (hence the inclusion of basic neuroscience as well as more applied techniques such as fMRI).
Biophysics often does not have university-level departments of its own, but have presence as groups across departments within the fields of biology, biochemistry, chemistry, computer science, mathematics, medicine, pharmacology, physiology, physics, and neuroscience. What follows is a list of examples of how each department applies its efforts toward the study of biophysics. This list is hardly all inclusive. Nor does each subject of study belong exclusively to any particular department. Each academic institution makes its own rules and there is much mixing between departments.

Biology and molecular biology - Almost all forms of biophysics efforts are included in some biology department somewhere. To include some: gene regulation, single protein dynamics, bioenergetics, patch clamping, biomechanics.

Structural biology - angstrom-resolution structures of proteins, nucleic acids, lipids, carbohydrates, and complexes thereof.

Biochemistry and chemistry - biomolecular structure, siRNA, nucleic acid structure, structure-activity relationships.

Computer science - Neural networks, Biomolecular and drug databases.

Computational chemistry - Molecular dynamics simulation, Molecular docking, Quantum chemistry

Bioinformatics - sequence alignment, structural alignment, Protein structure prediction

Mathematics - graph/network theory, population modeling, dynamical systems, phylogenetics.

Medicine and neuroscience - tackling neural networks experimentally (brain slicing) as well as theoretically (computer models), membrane permitivity, gene therapy, understanding tumors.

Pharmacology and physiology - channel biology, biomolecular interactions, cellular membranes, polyketides.

Physics - Biomolecular free energy, stochastic processes, covering dynamics.
Many biophysical techniques are unique to this field.
Many of the research traditions in biophysics were initiated by scientists who were straight physicists, chemists, and biologists by training.

Contents
Topics in biophysics and related fields
Famous biophysicists
Other notable biophysicists
References
See also
External links

Topics in biophysics and related fields



Animal locomotion

Cellular biophysics

Molecular biophysics

Channels, receptors and transporters

Electrophysiology

Cell membranes

Bioenergetics

Gravitational biology

Molecular motors

Muscle and contractility

Nucleic acids

Photobiophysics and biophotonics

Proteins

Radiobiology

Signaling

Supramolecular assemblies

Spectroscopy, imaging, etc.

Systems neuroscience

Neural encoding

Bionics

Polysulphur membranes

Biosensor and Bioelectronics

Quantum biology

Famous biophysicists



Luigi Galvani, discoverer of bioelectricity

Hermann von Helmholtz, first to measure the velocity of nerve impulses; studied hearing and vision

Alan Hodgkin & Andrew Huxley, mathematical theory of how ion fluxes produce nerve impulses

Georg von Békésy, research on the human ear

Bernard Katz, discovered how synapses work

Hermann J. Muller, discovered that X-rays cause mutations

Linus Pauling & Robert Corey, co-discoverers of the alpha helix and beta sheet structures in proteins

Fritz-Albert Popp, pioneer of biophotons work

J. D. Bernal, X-ray crystallography of plant viruses and proteins

Rosalind Franklin, Maurice Wilkins, James D. Watson and Francis Crick, pioneers of DNA crystallography and co-discoverers of the genetic code

Max Perutz & John Kendrew, pioneers of protein crystallography

Allan Cormack & Godfrey Hounsfield, development of computer assisted tomography

Paul Lauterbur & Peter Mansfield, development of magnetic resonance imaging

Other notable biophysicists



Adolf Eugen Fick, responsible for Fick's law of diffusion and a method to determine cardiac output.

Howard Berg, characterized properties of bacterial chemotaxis

Steven Block, observed the motions of enzymes such as kinesin and RNA polymerase with optical tweezers

Carlos Bustamante, known for single-molecule biophysics of molecular motors and biological polymer physics

Steven Chu, Nobel Laureate who helped develop optical trapping techniques used by many biophysicists

Friedrich Dessauer, research on radiation, especially X-rays

Julio Fernandez

John J. Hopfield, worked on error correction in Transcription and Translation (kinetic proof-reading), and associative memory models (Hopfield net)

Martin Karplus, research on molecular dynamical simulations of biological macromolecules.

Franklin Offner, professor emeritus at Northwestern University of professor of biophysics, biomedical engineering and electronics who developed a modern prototype of the electroencephalograph and electrocardiograph called the dynograph

Benoit Roux

Mikhail Volkenshtein, Revaz Dogonadze & Zurab Urushadze, authors of the 1st Quantum-Mechanical (Physical) Model of Enzyme Catalysis, supported a theory that enzyme catalysis use quantum-mechanical effects such as tunneling.

John P. Wikswo, research on biomagnetism

Douglas Warrick, specializing in bird flight (hummingbirds and pigeons)

Balaji V N, specialized in computational biology

Ernest C. Pollard — founder of the Biophysical Society

Marvin Makinen, pioneer of the structural basis of enzyme action

Gopalasamudram Narayana Iyer Ramachandran, developer of the Ramachandran plot and pioneer of the collagen triple-helix structure prediction

References



★ Perutz M.F. Proteins and Nucleic Acids, Elsevier, Amsterdam, 1962

The haemoglobin molecule, Perutz MF, , , Proceedings of the Royal Society of London. Series B, 1969 PMID 4389425

★ Dogonadze R.R. and Urushadze Z.D. Semi-Classical Method of Calculation of Rates of Chemical Reactions Proceeding in Polar Liquids.- ''J.Electroanal.Chem.'', 32, 1971, pp. 235-245

★ Volkenshtein M.V., Dogonadze R.R., Madumarov A.K., Urushadze Z.D. and Kharkats Yu.I. Theory of Enzyme Catalysis.- ''Molekuliarnaya Biologia'' (Moscow), 6, 1972, pp. 431-439 (In Russian, English summary)

★ Cotterill, R.M.J., ''Biophysics : An Introduction'', Wiley, 2002. ISBN 978-0471485384.

★ Sneppen K. and Zocchi G., ''Physics in Molecular Biology'', Cambridge University Press, 2005. ISBN 0-521-84419-3

See also



Important publications in biophysics (biology)

important publications in biophysics (physics)

External links



Biophysical Society

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